Mutation, HGT, and superbugs

Open your materials, follow the steps, then turn in your work.

Explain how mutation and horizontal gene transfer spread resistance genes and create superbugs.

1. Open your materials

Use the materials named in the first step below. Open lesson resources.

2. Start the work

Define mutation and horizontal gene transfer in your own words.

Show all 6 required steps
  1. Define mutation and horizontal gene transfer in your own words.
  2. Read how bacteria swap resistance genes even between different strains.
  3. Draw how one resistant cell can share a resistance gene with neighbors.
  4. Connect this to why superbugs can resist several antibiotics at once.
  5. Use your colony data to imagine how a resistant colony could take over.
  6. Write one sentence linking culturing, resistance, and stewardship.

Lost your place? Lost your place? Check your step: if you have not defined mutation and horizontal gene transfer in your own words, start there; then read how bacteria swap resistance genes across strains, draw one resistant cell passing a gene to a neighbor, and finish by writing one sentence linking your colony data, resistance, and antibiotic stewardship.

Check your work before submitting

  • You will be able to explain mutation and horizontal gene transfer.
  • You will be able to describe how resistance genes spread between bacteria.
  • You will be able to explain how superbugs arise.

3. Turn in your work

DueCheck Schoology
Hand in
HGT mechanism definitions, conjugation diagram with labeled parts, multi-resistance explanation, colony-data application scenario, and linking sentence connecting culturing to resistance to stewardship.
How to submit and name your file

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How this lesson connects

Keep using what you learned last class: A streak plate isolates single cells so that each colony descends from one bacterium, which is why counting distinct colonies and describing consistent morphology gives you reliable data about a single strain. Today: Resistance genes ride on plasmids that bacteria pass sideways through conjugation, transformation, and transduction, so a susceptible cell can become multi-drug resistant in one transfer, which is why superbugs spread resistance faster than mutation alone ever could.

Optional: listen or watch a unit review
Optional unit study notebook
Growing bacteria safely: aseptic technique, culturing, and how superbugs resist antibiotics.
Open the notebook
Optional review video
Audio overviewVideo overviewMind mapStudy guideFlashcardsQuizData table
Need help? Warm-up, timing, and directions

💡 Big idea: Resistance genes ride on plasmids that bacteria pass sideways through conjugation, , and transduction, so a susceptible cell can become multi-drug resistant in one transfer, which is why superbugs spread resistance faster than alone ever could.

  1. 0-10 minDefine and in notebook; list the three HGT mechanisms (conjugation, , transduction)
  2. 10-25 minRead how bacteria swap resistance genes via ; summarize in two sentences
  3. 25-42 minDraw a diagram: one resistant cell shares a resistance with a neighbor via conjugation; label all parts
  4. 42-55 minExplain how one HGT event can confer resistance to multiple antibiotics simultaneously; connect to the mechanism classes from the previous unit
  5. 55-68 minUse your data: if one colony on your plate were resistant, how long and under what conditions would it take over the plate? Write your reasoning
  6. 68-80 minWrite the linking sentence: culturing produces data, resistance explains what the data means, stewardship is what we do about it
Mr. Mendoza's 5-minute intro
  • MRSA (methicillin-resistant Staphylococcus aureus) kills more Americans each year than HIV; it became resistant through exactly the mechanisms you are about to study.
  • Unlike animals, bacteria can pass resistance genes to bacteria of a completely different species; they do not have to wait for reproduction.
  • Your data from Wednesday gives you a real population to apply these ideas to.
  • Exit goal: a HGT diagram showing a resistance gene moving between cells and a superbug connection sentence.
Know by the end
  • (HGT) moves DNA between bacteria via conjugation ( transfer), (environmental DNA uptake), or transduction (phage-mediated).
  • Because resistance genes often travel on plasmids, a single HGT event can make a previously susceptible bacterium resistant to multiple antibiotics simultaneously.
  • Superbugs (like MRSA and CRE) carry multiple resistance genes acquired through HGT over time; some are now resistant to all available antibiotics.

PLTW connection and today's work

Open Activity 1.2.4 When Antibiotics Fail in myPLTW, then measure the inhibition zones on your incubated plates.

Today's stopping point: Plates should be inoculated (Wednesday); zone measurements and conclusion due today.

PLTW activity titles identify the course connection. If your account will not open, use the posted materials for today and tell Mr. Mendoza. Do not mark an online activity complete unless you completed it.

Course connection

  • Activity 1.2.4 When Antibiotics Fail
Open Activity 1.2.4 When Antibiotics Fail in myPLTW

Use the turn-in directions at the top of this page. Do not create a second submission unless your teacher asks for one.

Show another explanation or a smaller first step

Need help? Choose a starting point

Need a running start
Before the reading, sketch two bacteria and draw an arrow labeled "plasmid with resistance gene" from one to the other. Having that picture of a gene moving sideways makes the three transfer mechanisms click when you read them.
On track
Explain, in a labeled drawing plus a sentence, how one resistant cell passes a resistance gene to neighbors and how horizontal gene transfer lets a superbug end up resistant to several antibiotics at once.
Stuck? Get unstuck
If the three mechanisms blur together, anchor each to one image: conjugation is a "bridge" passing a plasmid, transformation is "picking up" loose DNA from the environment, transduction is a virus acting as a "delivery truck." Learn one mechanism cold first, then add the others.
Push me further
Using your own colony data, model what happens over a few rounds if one resistant colony can pass its plasmid to neighbors before you apply an antibiotic. Predict how quickly the resistant colonies take over, and connect that to why finishing a full antibiotic course matters.
Lesson resources: reading, slides, and vocabulary
Socratic teaching slide deck

The deck carries the prior idea forward, lets you inspect an analogy, maps the rule to biology, and ends with the same evidence decision and exit ticket used on this page.

Generated from this lesson's canonical data with a red-team citation check.

Carry forward

A isolates single cells so that each descends from one bacterium, which is why counting distinct colonies and describing consistent morphology gives you reliable data about a single strain.

Daily take-home

Resistance genes ride on plasmids that bacteria pass sideways through conjugation, , and transduction, so a susceptible cell can become multi-drug resistant in one transfer, which is why superbugs spread resistance faster than alone ever could.

Inspect the analogy

An airport checkpoint uses an ID check, a metal detector, and an X-ray scanner.

  1. What can the ID check detect?
  2. What might set off the metal detector by mistake?
  3. Why do we need the X-ray if we already checked their ID?
Rule

A decision is stronger when the test fits the question and its limits are known.

Where it breaks

Medical decisions also depend on biology, patient context, ethics, and professional judgment.

Map the analogy to biology
  • The ID check maps to confirming patient identity.
  • The metal detector maps to a rapid, non-specific screening test.
  • The X-ray scanner maps to a detailed, specific diagnostic test.
Read this first

Driving question: A patient carries a gut bacterium that is harmless but resistant to several antibiotics. How could its resistance genes end up inside a dangerous strain, turning a treatable infection into an untreatable one?

What you already know: A isolates single cells so that each descends from one bacterium, which is why counting distinct colonies and describing consistent morphology gives you reliable data about a single strain.

New idea: Resistance genes ride on plasmids that bacteria pass sideways through conjugation, , and transduction, so a susceptible cell can become multi-drug resistant in one transfer, which is why superbugs spread resistance faster than alone ever could.

Visual or model: F1. F1. A lesson illustration or teaching diagram for Mutation, HGT, and superbugs. Use it with E1-E3; it is a model or context image, not experimental or patient data. What to notice: Trace the labeled testing, treatment, or biological process and identify where evidence limits the decision.

  1. Observe or measure the relevant feature in today's lesson.
  2. Organize the observation with a stable evidence ID.
  3. Apply this rule: A decision is stronger when the test fits the question and its limits are known.
  4. Choose the option the evidence supports and state the limit of the conclusion.

Real biomedical example: A patient carries a gut bacterium that is harmless but resistant to several antibiotics. How could its resistance genes end up inside a dangerous strain, turning a treatable infection into an untreatable one?

What the evidence supports: E1-E3 and F1 support the daily take-home when the response meets the stated success criteria.

What it cannot prove: The package does not support claims beyond this lesson's or any real patient diagnosis.

Vocabulary:
  • : A set of careful practices used to keep microbes out of a sterile area, protecting samples, cultures, and patients from .
  • : A population of microbes or cells grown on purpose in a nutrient medium so they can be studied, identified, or tested.
  • : A visible cluster of identical microorganisms growing on a plate, all descended from a single original cell.
  • : The slowing or blocking of a process, such as an stopping bacteria from growing or a molecule shutting down an .
  • : A change in the ; some change a enough to cause disease, many do not.
  • : The passing of genes between organisms, often bacteria, without reproduction, a major way resistance spreads.

Use it now: Choose one decision option. Cite E1 and E3, then explain how the rule connects the evidence to your choice.

Go further, optional: The source links below are optional enrichment. Every fact required for today's local evidence decision appears in this lesson package.

Evidence set and decision
E1 · Source fact

Antimicrobial resistance can arise through or acquired genetic material and spread under selection, so a resistance explanation requires organism, method, and susceptibility evidence rather than the presence of a gene term alone.

Limit: A classroom model or zone result cannot identify every resistance mechanism or determine treatment for a real patient.

E2 · Teaching model

A decision is stronger when the test fits the question and its limits are known.

Limit: Medical decisions also depend on biology, patient context, ethics, and professional judgment.

E3 · Task criterion

You can explain and .

Limit: E3 defines the classroom product or success criterion. It is not independent scientific evidence and cannot justify a clinical or causal claim.

PLTW-GEND-2026-10-06 · Simulated classroom evidence scenario

Your role: medical interventions team member

Decision: Your team must decide what the evidence from today's lesson supports before submitting the notebook record named on today's page.

  • Treat the implant decision as ethical as well as clinical, because an infant cannot consent to a claim about normal.
  • Recommend the implant for every deaf infant, since it restores normal hearing and refusing it means refusing an obvious cure.
  • Ask what the family and deaf adults say about benefit and burden before defending either side of this claim.

Response: State one choice, cite at least two evidence IDs, explain the rule that connects them, and add one limitation. Submit it as the notebook record.

Claim ceiling: Today's evidence supports a classroom claim about today's lesson. It cannot prove causation, diagnose a real patient, or justify action outside this room.

Composite case file · PLTW-GEND-2026-10-06

Reason for review: Your team must decide what the evidence from today's lesson supports before submitting the notebook record named on today's page.

Context: Resistance genes can move between bacteria, even between different species, on mobile pieces of DNA, so bacteria evolve resistance far faster than alone would allow, which is what makes superbugs so hard to stop.

Timeline:
  • T1: Define and in your own words.
  • T2: Read how bacteria swap resistance genes even between different strains.
  • T3: Draw how one resistant cell can share a resistance gene with neighbors.
  • T4: Connect this to why superbugs can resist several antibiotics at once.
  • T5: Use your data to imagine how a resistant colony could take over.
  • T6: Write one sentence linking culturing, resistance, and stewardship.
Evidence records:
  • E1: Antimicrobial resistance can arise through or acquired genetic material and spread under selection, so a resistance explanation requires organism, method, and susceptibility evidence rather than the presence of a gene term alone.
  • E2: A decision is stronger when the test fits the question and its limits are known.
  • E3: You can explain and .

Measurements: No patient measurement is supplied unless it appears explicitly in E1-E3 or F1. Do not invent a value.

Figure finding: Teaching diagram for , HGT, and superbugs. Trace the labeled testing, treatment, or biological process and identify where evidence limits the decision. This is a teaching model, not patient or experimental data.

Uncertainty: This is a composite classroom scenario. Missing history, measurements, or confirmation tests remain unknown and limit the conclusion.

Watch the trap

Students often think Students often think bacteria become resistant only the way we picture evolution: a lucky appears, and resistant cells slowly out-survive the rest over many generations, one drug at a time.. The trap: That is a trap because it misses : bacteria can swap ready-made resistance genes sideways through conjugation ( transfer), (grabbing loose DNA), or transduction (phage delivery), even between different species, so a susceptible cell can become multi-drug resistant in a single event instead of waiting on its own mutations.

Worked example · a parallel case (guides, does not reveal)
HGT and superbugs notebook entry
Completes: Completes the resistance-mechanism notebook page: definitions of mutation and horizontal gene transfer, a labeled conjugation diagram, a multi-resistance explanation, a colony-data scenario, and a linking sentence.

Definitions in my own words:

  • Mutation: a random change in a bacterium's DNA. Once in a while a mutation happens to make the cell able to survive an antibiotic.
  • Horizontal gene transfer (HGT): when one bacterium passes a gene to another bacterium instead of to its offspring. Resistance genes can move this way, even between different species.

How one resistant cell shares its gene (conjugation): A resistant cell builds a bridge called a pilus to a neighbor, copies its resistance plasmid, and sends the copy across. Now both cells are resistant.

Why superbugs resist several drugs at once: Resistance genes often ride on the same plasmid. One transfer can hand over resistance to multiple antibiotics in a single step, so a cell can become multi-drug resistant without slowly earning each resistance on its own.

Colony-data scenario: On my plate, imagine one of my 14 colonies carried a resistance plasmid. If I added an antibiotic, that colony's descendants would survive and the others would die, so over time the resistant colony would take over the whole plate.

Linking sentence: Careful culturing lets us see resistant strains, resistance spreads through mutation and HGT, and that is exactly why stewardship (using antibiotics sparingly and correctly) matters.

Conjugation diagram: a donor cell with a resistance plasmid extends a pilus to a recipient cell and sends a plasmid copy, making both resistant.
Why this matters

This model shows the level of evidence and organization needed to complete: Completes the resistance-mechanism notebook page: definitions of mutation and horizontal gene transfer, a labeled conjugation diagram, a multi-resistance explanation, a colony-data scenario, and a linking sentence.

Build yours step by step
  1. Date and label the entry.
  2. Record the procedure, observation, or design decision clearly.
  3. End with what the evidence means and the next step.
Change it for a new task

Keep the structure. Replace the question, facts, measurements, and evidence. Then recheck units, vocabulary, and whether the conclusion goes beyond the evidence.

Also due today: Photograph and upload the page to your portfolio.

See the full worked example
Portal terms
CER:
Claim, Evidence, Reasoning: make a claim, back it with evidence, explain your reasoning.
SOP:
Standard Operating Procedure, the exact steps to follow (especially in a lab).
Tracker:
Your PLTW progress log where you record completed evidence.
myPLTW:
The PLTW course site where you do the online activities. Find it in Clever with your Microsoft sign-in, right next to Schoology.
This unit's vocabulary

Tap the speaker to hear a term. Add two of these to your notebook glossary with a definition and an example in your own words.

Build your vocabulary · optional, for extra credit

Pick just 2 or 3 words from today and make them yours: write what each one means in your own words, name the context clue or evidence that helped, then give one example from what you actually did in Mutation, HGT, and superbugs. Try your own words first; the glossary is there if you get stuck. This is voluntary and counts as extra credit, so keep it short.

aseptic technique
culture
colony
inhibition
mutation
horizontal gene transfer

Saved on this device. Show Mr. Mendoza or add these to your notebook glossary to claim the extra credit.

Teacher-posted resources

Classroom documents for this lesson are posted in Schoology. Open Clever, then Schoology, and find each one by the name shown on its card.

Catch-up / reteachFor: Need extra support
PLTW-MI Daily Activity Tracker Unit 1 (Final)
worksheet/handoutPosted in Schoology
Open in Schoology

Use this if you were absent, got stuck, or need another pass before you submit the lesson artifact.

Placement rationale

Matched Culturing, , superbugs by path:Medical-Interventions/Unit-1_How-to-Fight-Infection/00_Unit-Overview. Score 126. Visibility: student-schoology (student-facing resource; link through Schoology rather than local path).

Use during lessonFor: Everyone
MI Activity 1.2.1 Antibiotic Therapy
worksheet/handoutPosted in Schoology
Open in Schoology

Open this when the class reaches this activity and use it to complete the required lesson artifact.

Placement rationale

Matched Culturing, , superbugs by path:Medical-Interventions/Unit-1_How-to-Fight-Infection/1.2_-Treatment. Score 126. Visibility: student-schoology (student-facing resource; link through Schoology rather than local path).

Sign in to Clever with your district Microsoft account to open Schoology or myPLTW. Follow today's posted steps. If myPLTW will not open, use the posted alternative and tell Mr. Mendoza. Turn in your completed work through the Schoology assignment.

Practice: try a question, then check your answer

Claim ceiling for this check: Today's evidence supports a classroom claim about today's lesson. It cannot prove causation, diagnose a real patient, or justify action outside this room.

Quick self-check · commit, then reveal

A bacterium that was killed by three antibiotics last week is now resistant to all three, and no drug was used on it in between. Mutation alone is unlikely to explain this. What most likely happened, and by which mechanism could it happen in one step?

How sure are you?

Write an answer and pick a confidence to unlock the key.

Cumulative WebXam review · flash practice

Fast retrieval with instant answers, not the commit-then-reveal check above. Try each from memory first: write what you remember about the earlier units, then check yourself here.

Tap an answer to check it · nothing is recorded or graded
[Review: Who is the culprit? Identifying a pathogen with DNA and BLAST] What was the landmark international collaboration that identified the nucleotide base pairs of humans?
[Review: Getting ready to test: serial dilutions and the ELISA setup] A technician makes a serial dilution starting with 100 ng/mL of antigen, transferring equal parts antigen and water at each step. What is the concentration after the first two dilutions?
[Review: Reading the color: running an ELISA and trusting your controls] An ELISA result is read simply as a color change with no number attached. This kind of observed, non-measurable result is called what?
What is the purpose of a four-quadrant streak plate when inoculating a bacterial culture?
Missed class or ready for more?
🔬 Pre-lab simulation

Run this before you touch the bench. It is built from the real lab procedure, so the decisions you make here are the ones you will make with the equipment in your hands.

Did the Resistance Actually Transfer?
Open the simulation →
Where this leads: careers

What today's skills lead to. These are real health-science careers this course builds toward. Tap one to see, on the US Department of Labor's O*NET site, what the job actually involves, what it pays, and how fast it is growing.

What to do if you were absent
If YOU are absent

Today is individual work you can do from home: complete the same target above, then submit your Notebook check.

FOR A GRADE
Open Schoology

Go to Schoology to turn this in. Submit one PDF. Put your first and last name in the document header. Name the file: FirstName LastName - Assignment Title - YYYY-MM-DD.pdf. If you cannot get in, see Mr. Mendoza. Do not skip the work.

If MR. MENDOZA is absent

Class still runs. Complete the online activity above (it's self-guided). Need the concept taught without a teacher? Use this authoritative explainer:

CDC Antibiotic Resistance
How this is graded
For: Notebook check: HGT mechanism definitions, conjugation diagram with labeled parts, multi-resistance explanation, colony-data application scenario, and linking sentence connecting culturing to resistance to stewardship.
  • Complete
    Every required part of the artifact is present, nothing left blank.
  • Accurate
    The science and the data are correct and match the evidence.
  • Scientific reasoning
    You explain your claim with evidence and reasoning (CER), not just an answer.
  • Professional communication
    Clear, organized, labeled, and written the way a clinician or scientist would.
  • Submitted
    Go to Schoology to turn this in. Submit one PDF. Put your first and last name in the document header. Name the file: FirstName LastName - Assignment Title - YYYY-MM-DD.pdf. If you cannot get in, see Mr. Mendoza. Do not skip the work.