Rough draft.This research track is under review with Dr. Atit's lab. Content and sequence may still change.
Read it in pieces

Hunting the Exemplar Cleft Gene: Linkage to 1q32

Take the reading one piece at a time. For each piece: read it once, underline the sentence that says what happens, then look up any word in the list. Tap a word to see its definition.

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Piece 1 of 2

A DNA marker is a spot in the genome that varies between people and is easy to read, like a numbered signpost. It is NOT the disease gene; it is a known address you can track, like a mile-marker on a highway. When two spots are close on a chromosome they tend to travel together through generations, which is linkage; when far apart or on different chromosomes they get shuffled independently.

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Piece 2 of 2

This next family is NOT Mateo's. It is a large Van der Woude family where clefting and lip pits run as a clean dominant trait, the kind scientists use to corner a cleft gene. You genotype three markers, M-A near chromosome 8, M-B near chromosome 1 band q32, and M-C near chromosome 4. Across the affected members (an affected grandfather, mother, uncle, and son) every one carries M-B version 7, while no unaffected person (the married-in father, grandmother, daughter) carries version 7. The chromosome 8 and chromosome 4 markers are mixed among the affected people. Family co-segregation of this kind, plus linkage to chromosome 1q32-q41, is how the Van der Woude gene was first localized.

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Reading the Research

What to read
Read the title and the abstract only, not the whole paper. Kondo S, et al. 2002. IRF6 mutations cause VWS and PPS. Nat Genet. [PMID:12219090]
Why this source matters
This is the published evidence behind today's idea: You can corner an invisible gene by watching what visible signposts it refuses to let go of.
Reading moves
  1. Skim the title and abstract first to get the gist.
  2. Circle the one sentence that states the main claim.
  3. Box the evidence the authors give for that claim.
  4. Mark one sentence that confuses you, and move on.
Stop point
You do not need the methods or statistics yet. If a sentence is about lab technique or math you have not learned, mark it and skip it.
Your output
Write one claim-evidence sentence: what this source claims, and the one piece of evidence that backs it up.

Now put it together: In one or two sentences, say what this whole reading is telling you about Mateo. Then go back to the lesson and fill in the guided notes.